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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
LGG rs76320913 chr7:139663423 C/T 0.000199 401 15.2 18.18 4.68 KM Plot
LGG rs76339362 chr2:17977327 C/T 1.71E-8 402 15.2 16.22 7.33 KM Plot
LGG rs7634127 chr3:38969306 C/T 4.41E-5 407 11.63 16.47 15.13 KM Plot
LGG rs76346769 chr7:55985906 A/G 1.5E-10 407 15.2 15.93 7.8 KM Plot
LGG rs76358832 chr2:60588828 G/T 5.7E-5 403 15.35 16.68 8.03 KM Plot
LGG rs76495654 chr4:84436300 T/C 1.22E-15 396 14.92 18.07 5.17 KM Plot
LGG rs76505426 chr20:3338381 C/T 1.02E-7 406 15.97 11.55 6.83 KM Plot
LGG rs76571321 chr4:84433832 G/C 1.22E-15 396 14.92 18.07 5.17 KM Plot
LGG rs765867 chr10:869901 G/T 3.68E-5 405 15.17 17.73 12.17 KM Plot
LGG rs76626025 chr8:17510013 G/A 0 403 15.15 19.73 3.77 KM Plot
LGG rs76632498 chr5:93918593 CAA/C 4.45E-5 404 14.78 17.73 9.8 KM Plot
LGG rs76633777 chr7:64936645 C/T 9.18E-8 400 15.57 15.2 2.27 KM Plot
LGG rs7669133 chr4:856499 C/G 0 402 15.6 14.43 0.23 KM Plot
LGG rs76703794 chr6:36051199 C/T 1.02E-9 405 15.67 15.17 6.15 KM Plot
LGG rs7674021 chr4:171315144 A/G 9.27E-7 407 13.25 17.2 15.18 KM Plot